Description
The dataset represents the Supplementary material for the article devoted to the new finds of macrofungi in regions of Russian Far East, published in Rebriev et al., 2024. A total of 53 species of macromycetes are reported for the first time from 6 administrative units of the Russian Far East: Amur, Jewish Autonomous, Magadan, and Sakhalin Oblast, Khabarovsk and Primorskiy Krai. 11 species are reported as the first records for the Russian Far East. For some of the rare species, notes are given about the main differences in morphology and ecology, about the features of distribution. The identification of Pluteus hibbettii and Rhizopogon laricinus was confirmed by molecular genetic methods. The material was deposited in ABGI, LE, MAG, SVER, TOB, VLA herbaria as well as in the Yu. Rebriev (YuR) and A. Shiryaev (Shiryaev) personal collections.
Enregistrements de données
Les données de cette ressource occurrence ont été publiées sous forme d'une Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant qu'ensemble d'un ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 77 enregistrements.
Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.
Versions
Le tableau ci-dessous n'affiche que les versions publiées de la ressource accessibles publiquement.
Comment citer
Les chercheurs doivent citer cette ressource comme suit:
Rebriev Y, Bogacheva A, Bochkareva I, Bukharova N, Erofeeva E, Kapitonov V, Kochunova N, Malysheva E, Sazanova N, Shiryaev A, Zvyagina E (2024). New species of macromycetes for regions of the Russian Far East - 2024. Version 1.1. Federal Research Centre The Southern Scientific Centre of The Russian Academy of Sciences. Occurrence dataset. http://ipt.ugrasu.ru:8080/resource?r=rebriev5&v=1.1
Droits
Les chercheurs doivent respecter la déclaration de droits suivante:
L’éditeur et détenteur des droits de cette ressource est Federal Research Centre The Southern Scientific Centre of The Russian Academy of Sciences. Ce travail est sous licence Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0.
Enregistrement GBIF
Cette ressource a été enregistrée sur le portail GBIF, et possède l'UUID GBIF suivante : 49ccddcf-c5e0-410e-98c8-1f3b5da878d7. Federal Research Centre The Southern Scientific Centre of The Russian Academy of Sciences publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec l'approbation du Participant Node Managers Committee.
Mots-clé
ascomycetes; basidiomycetes; biodiversity; fungal distribution; morphological and molecular genetic identification; rare species; Russia; Occurrence
Contacts
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Couverture géographique
Six regions of Russian Far East: Amur Oblast, Jewish Autonomous Oblast, Khabarovsk Krai, Magadan Oblast, Primorskiy Krai, Sakhalin Oblast
| Enveloppe géographique | Sud Ouest [43,112, 127,293], Nord Est [63,905, 154,426] |
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Couverture temporelle
| Date de début / Date de fin | 1958-08-09 / 2023-11-04 |
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Données sur le projet
Pas de description disponible
| Titre | New species of macromycetes for the regions of the Russian Far East |
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Méthodes d'échantillonnage
Specimens were collected and preserved using standard mycological methods (Bondartsev, Singer, 1950)
| Etendue de l'étude | Information is given on 53 species of macromycetes (Ascomycota, Basidiomycota), first documented in the Russian Far East (11 species) or in its administrative regions (Amur, Jewish Autonomous, Magadan, and Sakhalin Oblast, Khabarovsk and Primorskiy Krai). |
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| Contrôle qualité | The specimens examined are deposited in ABGI (Blagoveshchensk), LE-F (Saint Petersburg), MAG (Magadan), SVER (Ekaterinburg), TOB (Tobolsk) and VLA (Vladivostok) herbaria. The novelty of the listed species for the Russian Far East was checked against existing literature, including the checklists of Bolshakov et al. (2021, 2022) and the electronic resource of the Global Biodiversity Information Facility (GBIF). |
Description des étapes de la méthode:
- The identification was carried out mainly by morphological methods. The identification of Pluteus hibbettii and Rhizopogon laricinus was confirmed by molecular genetic methods. Preparation for molecular analyses of the strains was performed by sampling a small piece of mycelium from the advancing zone of the colonies using Thermo Scientific Phire Plant Direct PCR Kit. For DNA extraction from voucher, small fragments of dried basidiomata were used. The procedure of DNA extraction completely corresponded to the manufacturer’s protocol of the Phytosorb Kit (ZAO Syntol, Russia). The procedures of amplification and sequencing of ITS fragment were performed with a standard pair of primers ITS1f-ITS4b (White et al., 1990; Gardes, Bruns, 1993). Sanger sequencing was carried out at the Center for collective use of scientific equipment “Cellular and molecular technology of studying plants and fungi” (Komarov Botanical Institute of the Russian Academy of Sciences, St. Petersburg) and the Youth Molecular Genetic Laboratory of Yugra State University.
Données de collection
| Nom de la collection | ABGI |
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| Nom de la collection | MAG |
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| Nom de la collection | SVER |
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| Nom de la collection | TOB |
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| Nom de la collection | VLA |
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| Nom de la collection | LE F |
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| Méthode de conservation des spécimens | Dried |
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Citations bibliographiques
- Bondartsev, A.S.; Singer, R.A. (1950). [A guide to the scientific study of higher Basidiomycetes according to collections]. Acta Inst. Bot. Acad. Sci. URSS (Pl. Crypt.) Ser. 2 1950 (6): 499-543, 50 figs.
- Rebriev Yu.A., Shiryaev A.G., Kochunova N.A., Sazanova N.A., Erofeeva E.A., Bukharova N.V., Kapitonov V.I., Bogacheva A.V., Bochkareva I.V., Zvyagina E.A., Malysheva E.F.New species of macromycetes for regions of the Russian Far East. 5 // Mikologiya i fitopatologiya. 2024. V. 58 (5). P. 381-390
- Gardes M., Bruns T.D. (1993) ITS primers with enhanced specificity for basidiomycetes application to the identification of mycorrhizae and rusts. Mol. Ecol. 1993. V. 2. P. 132–118. doi:10.1111/j.1365-294x.1993.tb00005.x
- White T.J., Bruns T., Lee S. et al. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (eds.). PCR Protocols: a guide to methods and applications. Academic Press, N. Y., P. 315–322.
Métadonnées additionnelles
| Objet | Despite the collective research efforts, a large proportion of the vast Russian Far Eastern territories still remains insufficiently or poorly known. The mycobiota of a number of nature reserves has not been fully studied. The considerable amount of material accumulated in the major herbaria collections has not been analysed and published. Due to the critical analysis of many groups of basidiomycetes with an advent of molecular methods, accumulated herbaria collections have to be sufficiently revised. This publication introduces the findings of macromycetes that are new for individual administrative divisions of the Far East or for the entire region altogether. |
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| Identifiants alternatifs | 49ccddcf-c5e0-410e-98c8-1f3b5da878d7 |
| http://ipt.ugrasu.ru:8080/resource?r=rebriev5 |