Descrição
The dataset share information for 13 specimens examined during the description of the new Suillus species from North Asia.The specimens of the Suillus bresadolae f. flavogriseus (Cazzoli & Consiglio) Klofac, Suillus nueschii var. caerulescens Singer, Suillus gastroflavus Zvyagina, Rebriev, Sazanova & E.F. Malysheva and new species are annotated. Annotations are accompanied by geographic data, images of original labels, fruiting bodies, exsicсates and microstructures.
Registros de Dados
Os dados deste recurso de ocorrência foram publicados como um Darwin Core Archive (DwC-A), que é o formato padronizado para compartilhamento de dados de biodiversidade como um conjunto de uma ou mais tabelas de dados. A tabela de dados do núcleo contém 13 registros.
This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.
Versões
A tabela abaixo mostra apenas versões de recursos que são publicamente acessíveis.
Como citar
Pesquisadores deveriam citar esta obra da seguinte maneira:
Zvyagina E, Sazanova N (2024). New Larix-associated Suillus species (Boletales, Agaricomycetes) from North Asia. Version 1.5. Yugra State University Biological Collection (YSU BC). Occurrence dataset. http://ipt.ugrasu.ru:8080/resource?r=kovalenkoi&v=1.5
Direitos
Pesquisadores devem respeitar a seguinte declaração de direitos:
O editor e o detentor dos direitos deste trabalho é Yugra State University Biological Collection (YSU BC). This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY-NC 4.0) License.
GBIF Registration
Este recurso foi registrado no GBIF e atribuído ao seguinte GBIF UUID: 5e2d1104-a25f-40ab-8a99-d8426a27b65e. Yugra State University Biological Collection (YSU BC) publica este recurso, e está registrado no GBIF como um publicador de dados aprovado por Participant Node Managers Committee.
Palavras-chave
Occurrence; Specimen
Contatos
- Provedor Dos Metadados ●
- Originador ●
- Ponto De Contato
http://orcid.org/0000-0003-2063-4847
- Provedor Dos Metadados ●
- Originador
- Curador
Cobertura Geográfica
Specimens originated from Italia (Suillus bresadolae f. flavogriseus (Cazzoli & Consiglio) Klofac MCVE18244 Ex Herb Simonini N1844) and Russian Federation from Altay Mountains (Suillus nueschii var. caerulescens Singer LE4547, LE4554), Irkutsk Region (Suillus sp. LE18056, LE18089, LE18421, LE4766) and Magadan Region (Suillus sp. MAG5111, MAG2642, MAG1307, MAG1308, Suillus gastroflavus Zvyagina, Rebriev, Sazanova & E.F. Malysheva Holotype MAG3480 and Paratype MAG5122/LE312702)
| Coordenadas delimitadoras | Sul Oeste [43,069, -177,188], Norte Leste [73,628, 1,406] |
|---|
Cobertura Taxonômica
13 specimens, 5 species, 1 variety, 1 form
| Espécie | Suillus gastroflavus, Ixocomus flavus |
|---|---|
| Variedade | Suillus nueschii var. caerulescens |
| Forma | Suillus bresadolae f. flavogriseus |
Cobertura Temporal
| Data Inicial / Data final | 1937-08-05 / 2018-08-21 |
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Dados Sobre o Projeto
The new laboratory of molecular methods for biodiversity research and monitoring was organized thanks to the support of the Russian Ministry of Sience and Education grant for organization of New Young Researcher Laboratories as part of the implementation of the national project Science and Universities.
| Título | Laboratory for the development of a metagenomic analysis methodology for express assessment of environmental impacts in conditions of intensive subsoil use on the basis of Yugra State University |
|---|---|
| Financiamento | Russian Ministry of Sience and Education grant for organization of New Young Researcher Laboratories as part of the implementation of the national project Science and Universities |
| Descrição do Design | Our goal is to develop molecular methods of biodiversity inventory with the aim of environmental impact assessment in the region of intence oil and gas management. With special love for fungi and raised bogs, we intend to initiate the molecular approach to study these important and vulnеrable communities |
O pessoal envolvido no projeto:
Métodos de Amostragem
Collections were made, documented and preserved using the standard methods (Bondartsev, Zinger, 1955, Tulloss, 1999, Halling, 1996)
| Área de Estudo | The dataset contains annotations of specimens used for comparative and phylogenetic study, as well as their images and links to DNA sequences in the GenBank |
|---|---|
| Controle de Qualidade | All determinations could be checked online or by the request of specimens from the LE and MAG. DNA sequences are deposited in Genbank. |
Descrição dos passos do método:
- Specimens were photographed in situ, examined for taste and smell, dried at temperatures below 50°C.
- Macroscopic descriptions were based on the study of both fresh and dried materials as well as on photographs.
- Microstructures were observed at ×400 and ×1000 in squash preparations in 5% KOH, Congo Red, and Melzer’s reagent. Up to 30 basidiospores, 10 hymenial cystidia, and 10 terminal elements of the pileipellis per specimen were measured to obtain descriptive statistics.
- Measurements were made in ADFImageCapture calibrated by OMP object-micrometre (LOMO). Dimensions are given as (absolute min) average min–average max (absolute max) of the all examined specimens, Q = average min–average max quotient (length/width ratio).
- PCR ITS products were obtained without DNA extraction using the standard protocol of Thermo Scientific Phire Tissue Direct PCR Master Mix kit.
- For amplification of the ITS region the primers ITS1-F, ITS4-B (Gardes, Bruns, 1993) were used.
- LSU (28S) was amplified with LR0R, LR5 (Vilgalys, Hester, 1990) pair of primers, TEF1 with EF1-983F and EF1-1567R (Rehner, Buckley, 2005).
- Amplified products were sequenced using BigDyeH Terminator 3.1 Cycle Sequencing Kit (Applied Biosystems, Foster City, California).
- The sequences were assembled in CodonCode Aligner V.9.0.1 (CodonCode Corporation).
Dados de Coleção
| Nome da Coleção | Komarov Botanical Institute of RAS |
|---|---|
| Identificador da Coleção | LE |
| Nome da Coleção | Institute of the Biological Problems of the North, Far-Eastern Branch of the Russian Academy of Sciences |
|---|---|
| Identificador da Coleção | MAG |
| Nome da Coleção | Museo di Storia Naturale di Venezia |
|---|---|
| Identificador da Coleção | MCVE |
| Métodos de preservação do espécime | Seco |
|---|
Citações bibliográficas
- Gardes, M., Bruns, T.D. (1993) ITS primers with enhanced specifity for Basidiomycetes: application to identification of mycorrhizae and rusts. Mol. Ecol. 2: 113–118.
- Vilgalys, R., Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4239–4246.
- Rehner, S.A., Buckley, E. (2005) A Beauveria phylogeny inferred from nuclear ITS and EF1-α sequences: Evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia 97: 84–98. http://dx.doi.org/10.3852/mycologia.97.1.84
- Halling, R. E. (1996) Recommendations for collecting mushrooms for scientific study. Pp. 135-141. In: Alexiades, M. N. and J. W. Sheldon (eds.), Selected Guidelines for Ethnobotanical Research: A Field Manual. The New York Botanical Garden Press, Bronx.
- Tulloss, R. (1999) Trial Year Notebook for the Great Smoky Mountains National Park All Taxa Biodiversity Inventory. Epigeous Macromycetes. 75 p.
- Bondartsev, A.S., Singer R.A. (1950) Guidelines for the collection of higher basidial fungi for their scientific study // Proceedings of the Komarov Botanical Institute Academy of Sciences of the USSR. V 2. ( 6). P. 499–572.
Metadados Adicionais
| Identificadores alternativos | 5e2d1104-a25f-40ab-8a99-d8426a27b65e |
|---|---|
| http://ipt.ugrasu.ru:8080/resource?r=kovalenkoi |