Descripción
The dataset share information for 13 specimens examined during the description of the new Suillus species from North Asia.The specimens of the Suillus bresadolae f. flavogriseus (Cazzoli & Consiglio) Klofac, Suillus nueschii var. caerulescens Singer, Suillus gastroflavus Zvyagina, Rebriev, Sazanova & E.F. Malysheva and new species are annotated. Annotations are accompanied by geographic data, images of original labels, fruiting bodies, exsicсates and microstructures.
Registros
Los datos en este recurso de registros biológicos han sido publicados como Archivo Darwin Core(DwC-A), el cual es un formato estándar para compartir datos de biodiversidad como un conjunto de una o más tablas de datos. La tabla de datos del core contiene 13 registros.
Este IPT archiva los datos y, por lo tanto, sirve como repositorio de datos. Los datos y los metadatos del recurso están disponibles para su descarga en la sección descargas. La tabla versiones enumera otras versiones del recurso que se han puesto a disposición del público y permite seguir los cambios realizados en el recurso a lo largo del tiempo.
Versiones
La siguiente tabla muestra sólo las versiones publicadas del recurso que son de acceso público.
¿Cómo referenciar?
Los usuarios deben citar este trabajo de la siguiente manera:
Zvyagina E, Sazanova N (2024). New Larix-associated Suillus species (Boletales, Agaricomycetes) from North Asia. Version 1.5. Yugra State University Biological Collection (YSU BC). Occurrence dataset. http://ipt.ugrasu.ru:8080/resource?r=kovalenkoi&v=1.5
Derechos
Los usuarios deben respetar los siguientes derechos de uso:
El publicador y propietario de los derechos de este trabajo es Yugra State University Biological Collection (YSU BC). Esta obra está bajo una licencia Creative Commons de Atribución/Reconocimiento-NoComercial (CC-BY-NC 4.0).
Registro GBIF
Este recurso ha sido registrado en GBIF con el siguiente UUID: 5e2d1104-a25f-40ab-8a99-d8426a27b65e. Yugra State University Biological Collection (YSU BC) publica este recurso y está registrado en GBIF como un publicador de datos avalado por Participant Node Managers Committee.
Palabras clave
Occurrence; Specimen
Contactos
- Proveedor De Los Metadatos ●
- Originador ●
- Punto De Contacto
http://orcid.org/0000-0003-2063-4847
- Proveedor De Los Metadatos ●
- Originador
- Curador
Cobertura geográfica
Specimens originated from Italia (Suillus bresadolae f. flavogriseus (Cazzoli & Consiglio) Klofac MCVE18244 Ex Herb Simonini N1844) and Russian Federation from Altay Mountains (Suillus nueschii var. caerulescens Singer LE4547, LE4554), Irkutsk Region (Suillus sp. LE18056, LE18089, LE18421, LE4766) and Magadan Region (Suillus sp. MAG5111, MAG2642, MAG1307, MAG1308, Suillus gastroflavus Zvyagina, Rebriev, Sazanova & E.F. Malysheva Holotype MAG3480 and Paratype MAG5122/LE312702)
| Coordenadas límite | Latitud Mínima Longitud Mínima [43,069, -177,188], Latitud Máxima Longitud Máxima [73,628, 1,406] |
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Cobertura taxonómica
13 specimens, 5 species, 1 variety, 1 form
| Especie | Suillus gastroflavus, Ixocomus flavus |
|---|---|
| Variedad | Suillus nueschii var. caerulescens |
| Forma | Suillus bresadolae f. flavogriseus |
Cobertura temporal
| Fecha Inicial / Fecha Final | 1937-08-05 / 2018-08-21 |
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Datos del proyecto
The new laboratory of molecular methods for biodiversity research and monitoring was organized thanks to the support of the Russian Ministry of Sience and Education grant for organization of New Young Researcher Laboratories as part of the implementation of the national project Science and Universities.
| Título | Laboratory for the development of a metagenomic analysis methodology for express assessment of environmental impacts in conditions of intensive subsoil use on the basis of Yugra State University |
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| Fuentes de Financiación | Russian Ministry of Sience and Education grant for organization of New Young Researcher Laboratories as part of the implementation of the national project Science and Universities |
| Descripción del diseño | Our goal is to develop molecular methods of biodiversity inventory with the aim of environmental impact assessment in the region of intence oil and gas management. With special love for fungi and raised bogs, we intend to initiate the molecular approach to study these important and vulnеrable communities |
Personas asociadas al proyecto:
Métodos de muestreo
Collections were made, documented and preserved using the standard methods (Bondartsev, Zinger, 1955, Tulloss, 1999, Halling, 1996)
| Área de Estudio | The dataset contains annotations of specimens used for comparative and phylogenetic study, as well as their images and links to DNA sequences in the GenBank |
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| Control de Calidad | All determinations could be checked online or by the request of specimens from the LE and MAG. DNA sequences are deposited in Genbank. |
Descripción de la metodología paso a paso:
- Specimens were photographed in situ, examined for taste and smell, dried at temperatures below 50°C.
- Macroscopic descriptions were based on the study of both fresh and dried materials as well as on photographs.
- Microstructures were observed at ×400 and ×1000 in squash preparations in 5% KOH, Congo Red, and Melzer’s reagent. Up to 30 basidiospores, 10 hymenial cystidia, and 10 terminal elements of the pileipellis per specimen were measured to obtain descriptive statistics.
- Measurements were made in ADFImageCapture calibrated by OMP object-micrometre (LOMO). Dimensions are given as (absolute min) average min–average max (absolute max) of the all examined specimens, Q = average min–average max quotient (length/width ratio).
- PCR ITS products were obtained without DNA extraction using the standard protocol of Thermo Scientific Phire Tissue Direct PCR Master Mix kit.
- For amplification of the ITS region the primers ITS1-F, ITS4-B (Gardes, Bruns, 1993) were used.
- LSU (28S) was amplified with LR0R, LR5 (Vilgalys, Hester, 1990) pair of primers, TEF1 with EF1-983F and EF1-1567R (Rehner, Buckley, 2005).
- Amplified products were sequenced using BigDyeH Terminator 3.1 Cycle Sequencing Kit (Applied Biosystems, Foster City, California).
- The sequences were assembled in CodonCode Aligner V.9.0.1 (CodonCode Corporation).
Datos de la colección
| Nombre de la Colección | Komarov Botanical Institute of RAS |
|---|---|
| Identificador de la Colección | LE |
| Nombre de la Colección | Institute of the Biological Problems of the North, Far-Eastern Branch of the Russian Academy of Sciences |
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| Identificador de la Colección | MAG |
| Nombre de la Colección | Museo di Storia Naturale di Venezia |
|---|---|
| Identificador de la Colección | MCVE |
| Métodos de preservación de los ejemplares | Secado |
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Referencias bibliográficas
- Gardes, M., Bruns, T.D. (1993) ITS primers with enhanced specifity for Basidiomycetes: application to identification of mycorrhizae and rusts. Mol. Ecol. 2: 113–118.
- Vilgalys, R., Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4239–4246.
- Rehner, S.A., Buckley, E. (2005) A Beauveria phylogeny inferred from nuclear ITS and EF1-α sequences: Evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia 97: 84–98. http://dx.doi.org/10.3852/mycologia.97.1.84
- Halling, R. E. (1996) Recommendations for collecting mushrooms for scientific study. Pp. 135-141. In: Alexiades, M. N. and J. W. Sheldon (eds.), Selected Guidelines for Ethnobotanical Research: A Field Manual. The New York Botanical Garden Press, Bronx.
- Tulloss, R. (1999) Trial Year Notebook for the Great Smoky Mountains National Park All Taxa Biodiversity Inventory. Epigeous Macromycetes. 75 p.
- Bondartsev, A.S., Singer R.A. (1950) Guidelines for the collection of higher basidial fungi for their scientific study // Proceedings of the Komarov Botanical Institute Academy of Sciences of the USSR. V 2. ( 6). P. 499–572.
Metadatos adicionales
| Identificadores alternativos | 5e2d1104-a25f-40ab-8a99-d8426a27b65e |
|---|---|
| http://ipt.ugrasu.ru:8080/resource?r=kovalenkoi |