Описание
Elena Zvyagina's personal collection of fungi collected as a result of field research in various regions of Russia. At the moment, the dataset is loaded mainly with specimens collected in North Karelia, Western Siberia, and the Russian Far East. The collection dataset also includes parts of specimens loaned by various herbaria and personal collections in the course of work on Boletaceae, even if these specimens were returned to the herbarium. The classical method of collection and preservation of dry specimens of macrofungi is used to store the material. A large part of collection has been sequenced and has attached sequence material. The collection is stored at the White Sea Biological Station of Moscow State University (186672, Russia, Republic of Karelia, poselok Primorsky).
Записи данных
Данные этого occurrence ресурса были опубликованы в виде Darwin Core Archive (DwC-A), который является стандартным форматом для обмена данными о биоразнообразии в виде набора из одной или нескольких таблиц. Основная таблица данных содержит 2 161 записей.
Данный экземпляр IPT архивирует данные и таким образом служит хранилищем данных. Данные и метаданные ресурсов доступны для скачивания в разделе Загрузки. В таблице версий перечислены другие версии ресурса, которые были доступны публично, что позволяет отслеживать изменения, внесенные в ресурс с течением времени.
Версии
В таблице ниже указаны только опубликованные версии ресурса, которые доступны для свободного скачивания.
Как оформить ссылку
Исследователи должны дать ссылку на эту работу следующим образом:
Zvyagina E (2025). The Fungarium of Elena Zvyagina. Version 1.102. Yugra State University Biological Collection (YSU BC). Occurrence dataset. http://ipt.ugrasu.ru:8080/resource?r=ez-f&v=1.102
Права
Исследователи должны соблюдать следующие права:
Публикующей организацией и владельцем прав на данную работу является Yugra State University Biological Collection (YSU BC). Эта работа находится под лицензией Creative Commons Attribution (CC-BY 4.0).
Регистрация в GBIF
Этот ресурс был зарегистрирован в GBIF, ему был присвоен следующий UUID: ff67eb9c-8d71-4b15-819d-d82a4e65cafc. Yugra State University Biological Collection (YSU BC) отвечает за публикацию этого ресурса, и зарегистрирован в GBIF как издатель данных при оподдержке Participant Node Managers Committee.
Ключевые слова
Occurrence; Occurrence
Контакты
- Metadata Provider ●
- Originator ●
- Point Of Contact
https://orcid.org/0000-0003-2063-4847
Географический охват
The geography of the collection covers mainly Northern West Siberia and other regions sampled during the field work in several regions of Russia.
| Ограничивающие координаты | Юг Запад [46,559, -169,453], Север Восток [71,301, -168,047] |
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Таксономический охват
Описание отсутсвует
| Kingdom | fungi |
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Временной охват
| Дата начала / Дата окончания | 1941-01-01 / 2023-01-01 |
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Данные проекта
The new laboratory of molecular methods for biodiversity research and monitoring was organized thanks to the support of the Russian Ministry of Sience and Education grant for organization of New Young Researcher Laboratories as part of the implementation of the national project Science and Universities.
| Название | Laboratory for the development of a metagenomic analysis methodology for express assessment of environmental impacts in conditions of intensive subsoil use on the basis of Yugra State University |
|---|---|
| Финансирование | Russian Ministry of Sience and Education grant for organization of New Young Researcher Laboratories as part of the implementation of the national project Science and Universities |
| Описание района исследования | Our goal is to develop molecular methods of biodiversity inventory with the aim of environmental impact assessment in the region of intence oil and gas management. With special love for fungi and raised bogs, we intend to initiate the molecular approach to study these important and vulnеrable communities |
Исполнители проекта:
Методы сбора
Specimens were photographed in situ for macromorphological features. Fading out features like smell and taste were described in field. Sporocarps were dried in the mushroom dryer under 40-50 °C. Dried specimens are stored in Ziplocs and paper envelopes.
| Охват исследования | Collections were made mostly in boreal zone of Eurasia during the study of fungal diversity of taiga forests, subpolar mountains ecosystems and taxonomy of Boletales order. |
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| Контроль качества | Most of the specimens are providet with photografs. DNA sequences uploaded to GenBank. Specimens are available by the personal request |
Описание этапа методики:
- Forays were undertaken randomly
- Specimens were photographed in situ for macromorphological features
- Fading out features like smell and taste were described in field
- Sporocarps were extracted from substrate and putted into aluminum foil
- Sporocarps were dried in the mushroom dryer under 40-50 °C
- Dried specimens are stored in Ziplocs and paper envelopes
- For amplification of the ITS region the primers ITS1-F, ITS4-B (Gardes, Bruns, 1993) were used
- LSU (28S) was amplified with LR0R, LR5 (Vilgalys, Hester, 1990) pair of primers, TEF1 with EF1-983F and EF1-1567R (Rehner, Buckley, 2005)
- Amplified products were sequenced using BigDyeH Terminator 3.1 Cycle Sequencing Kit (Applied Biosystems, Foster City, California). 10) The sequences were assembled in CodonCode Aligner V.9.0.1 (CodonCode Corporation)
Данные коллекции
| Название коллекции | Komarov Botanical Institute of RAS |
|---|---|
| Идентификатор коллекции | LE |
| Название коллекции | Institute of the Biological Problems of the North, Far-Eastern Branch of the Russian Academy of Sciences |
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| Идентификатор коллекции | MAG |
| Методы сохранения образцов | Dried |
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Библиографические ссылки
- Gardes, M., Bruns, T.D. (1993) ITS primers with enhanced specifity for Basidiomycetes: application to identification of mycorrhizae and rusts. Mol. Ecol. 2: 113–118.
- Vilgalys, R., Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4239–4246.
- Rehner, S.A., Buckley, E. (2005) A Beauveria phylogeny inferred from nuclear ITS and EF1-α sequences: Evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia 97: 84–98.
Дополнительные метаданные
| Альтернативные идентификаторы | ff67eb9c-8d71-4b15-819d-d82a4e65cafc |
|---|---|
| http://ipt.ugrasu.ru:8080/resource?r=ez-f |