Description
Elena Zvyagina's personal collection of fungi collected as a result of field research in various regions of Russia. At the moment, the dataset is loaded mainly with specimens collected in North Karelia, Western Siberia, and the Russian Far East. The collection dataset also includes parts of specimens loaned by various herbaria and personal collections in the course of work on Boletaceae, even if these specimens were returned to the herbarium. The classical method of collection and preservation of dry specimens of macrofungi is used to store the material. A large part of collection has been sequenced and has attached sequence material. The collection is stored at the White Sea Biological Station of Moscow State University (186672, Russia, Republic of Karelia, poselok Primorsky).
Enregistrements de données
Les données de cette ressource occurrence ont été publiées sous forme d'une Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant qu'ensemble d'un ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 2 161 enregistrements.
Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.
Versions
Le tableau ci-dessous n'affiche que les versions publiées de la ressource accessibles publiquement.
Comment citer
Les chercheurs doivent citer cette ressource comme suit:
Zvyagina E (2025). The Fungarium of Elena Zvyagina. Version 1.129. Yugra State University Biological Collection (YSU BC). Occurrence dataset. http://ipt.ugrasu.ru:8080/resource?r=ez-f&v=1.129
Droits
Les chercheurs doivent respecter la déclaration de droits suivante:
L’éditeur et détenteur des droits de cette ressource est Yugra State University Biological Collection (YSU BC). Ce travail est sous licence Creative Commons Attribution (CC-BY) 4.0.
Enregistrement GBIF
Cette ressource a été enregistrée sur le portail GBIF, et possède l'UUID GBIF suivante : ff67eb9c-8d71-4b15-819d-d82a4e65cafc. Yugra State University Biological Collection (YSU BC) publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec l'approbation du Participant Node Managers Committee.
Mots-clé
Occurrence; Occurrence
Contacts
- Fournisseur Des Métadonnées ●
- Créateur ●
- Personne De Contact
https://orcid.org/0000-0003-2063-4847
Couverture géographique
The geography of the collection covers mainly Northern West Siberia and other regions sampled during the field work in several regions of Russia.
| Enveloppe géographique | Sud Ouest [46,559, -169,453], Nord Est [71,301, -168,047] |
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Couverture taxonomique
Pas de description disponible
| Kingdom | fungi |
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Couverture temporelle
| Date de début / Date de fin | 1941-01-01 / 2023-01-01 |
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Données sur le projet
The new laboratory of molecular methods for biodiversity research and monitoring was organized thanks to the support of the Russian Ministry of Sience and Education grant for organization of New Young Researcher Laboratories as part of the implementation of the national project Science and Universities.
| Titre | Laboratory for the development of a metagenomic analysis methodology for express assessment of environmental impacts in conditions of intensive subsoil use on the basis of Yugra State University |
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| Financement | Russian Ministry of Sience and Education grant for organization of New Young Researcher Laboratories as part of the implementation of the national project Science and Universities |
| Description du domaine d'étude / de recherche | Our goal is to develop molecular methods of biodiversity inventory with the aim of environmental impact assessment in the region of intence oil and gas management. With special love for fungi and raised bogs, we intend to initiate the molecular approach to study these important and vulnеrable communities |
Les personnes impliquées dans le projet:
Méthodes d'échantillonnage
Specimens were photographed in situ for macromorphological features. Fading out features like smell and taste were described in field. Sporocarps were dried in the mushroom dryer under 40-50 °C. Dried specimens are stored in Ziplocs and paper envelopes.
| Etendue de l'étude | Collections were made mostly in boreal zone of Eurasia during the study of fungal diversity of taiga forests, subpolar mountains ecosystems and taxonomy of Boletales order. |
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| Contrôle qualité | Most of the specimens are providet with photografs. DNA sequences uploaded to GenBank. Specimens are available by the personal request |
Description des étapes de la méthode:
- Forays were undertaken randomly
- Specimens were photographed in situ for macromorphological features
- Fading out features like smell and taste were described in field
- Sporocarps were extracted from substrate and putted into aluminum foil
- Sporocarps were dried in the mushroom dryer under 40-50 °C
- Dried specimens are stored in Ziplocs and paper envelopes
- For amplification of the ITS region the primers ITS1-F, ITS4-B (Gardes, Bruns, 1993) were used
- LSU (28S) was amplified with LR0R, LR5 (Vilgalys, Hester, 1990) pair of primers, TEF1 with EF1-983F and EF1-1567R (Rehner, Buckley, 2005)
- Amplified products were sequenced using BigDyeH Terminator 3.1 Cycle Sequencing Kit (Applied Biosystems, Foster City, California). 10) The sequences were assembled in CodonCode Aligner V.9.0.1 (CodonCode Corporation)
Données de collection
| Nom de la collection | Komarov Botanical Institute of RAS |
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| Identifiant de collection | LE |
| Nom de la collection | Institute of the Biological Problems of the North, Far-Eastern Branch of the Russian Academy of Sciences |
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| Identifiant de collection | MAG |
| Méthode de conservation des spécimens | Dried |
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Citations bibliographiques
- Gardes, M., Bruns, T.D. (1993) ITS primers with enhanced specifity for Basidiomycetes: application to identification of mycorrhizae and rusts. Mol. Ecol. 2: 113–118.
- Vilgalys, R., Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4239–4246.
- Rehner, S.A., Buckley, E. (2005) A Beauveria phylogeny inferred from nuclear ITS and EF1-α sequences: Evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia 97: 84–98.
Métadonnées additionnelles
| Identifiants alternatifs | ff67eb9c-8d71-4b15-819d-d82a4e65cafc |
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| http://ipt.ugrasu.ru:8080/resource?r=ez-f |